Insertion junction: CLIP2.032142_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032142
Chromosome:chromosome 2
Location:6995018
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389541 OPR9 OctotricoPeptide Repeat protein 9; (1 of 1) IPR000104//IPR011237//IPR011335//IPR013584 - Antifreeze protein, type I // Peptidase M16 domain // Restriction endonuclease type II-like // RAP domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTGCGCCCACGCGGCCCTGAACGGCACCGTGTCCACTTGCCGCATCG
Internal bar code:AGACACAAGCCGGCGTGGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2215
LEAP-Seq percent confirming:78.2609
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CGACAGTGAAGTGTCCTGCT
Suggested primer 2:CAGACAAGAACACGTCCCGA