Insertion junction: CLIP2.032142_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.032142
Chromosome:chromosome 2
Location:6995020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389541 OPR9 OctotricoPeptide Repeat protein 9; (1 of 1) IPR000104//IPR011237//IPR011335//IPR013584 - Antifreeze protein, type I // Peptidase M16 domain // Restriction endonuclease type II-like // RAP domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGCGCCGCGCGACCGAGGTGCCGCCCGCGGAGCCGGTGCTCACGCAG
Internal bar code:AGACACAAGCCGGCGTGGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1993
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CAGACAAGAACACGTCCCGA
Suggested primer 2:CGACAGTGAAGTGTCCTGCT