Insertion junction: CLIP2.032149_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.032149
Chromosome:chromosome 10
Location:3399578
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443900 BOR1 (1 of 1) PF00955 - HCO3- transporter family (HCO3_cotransp); Borate transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCGTAGCAAGGGGCCGCGGGTGTTGGGCACGCGCACCATCACACACA
Internal bar code:TAGATTATAGTAATGTTGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:703
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGATGCAGTGGGCTTAAT
Suggested primer 2:AGAACATCGGTGTGAGGCTG