Insertion junction: CLIP2.032165_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.032165
Chromosome:chromosome 12
Location:1092124
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g491400 (1 of 2) K02977 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCGACATCAGTTGGCTGCGATTGGAGCGGCTGCTGGCGAACACGAACG
Internal bar code:ATAGAAGCAGGCTGATGGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2695
LEAP-Seq percent confirming:97.7273
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCACTTACTCTTGGTCGT
Suggested primer 2:GGTCCATGCAGTAAGCCCTT