Insertion junction: CLIP2.032177_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032177
Chromosome:chromosome 1
Location:3339545
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021600 HEL1 (1 of 1) PTHR24031//PTHR24031:SF255//PTHR24031:SF274 - RNA HELICASE // DEAD-BOX ATP-DEPENDENT RNA HELICASE 40 // SUBFAMILY NOT NAMED; DEAD-box RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCTCTCGCAAGTGCACACACGGCCTCACACAAAACCCGCTCACACCT
Internal bar code:GAGACAAGGTATCCTTACATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3349
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCCATCGATCAGACTCG
Suggested primer 2:CTCCTGCGACATGAAGGTGT