Insertion junction: CLIP2.032179_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032179
Chromosome:chromosome 10
Location:6722638
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g466950 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTTGGGACCCATTCTACCCGTACCAGCTGCTGGACCTGTATGGCAAGG
Internal bar code:ACATTTCAGGAAATATACTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1935
LEAP-Seq percent confirming:75.6757
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CATAAATTGCCTGCTCGCCC
Suggested primer 2:CTGCAAATGTCAGCGTTGCT