Insertion junction: CLIP2.032189_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032189
Chromosome:chromosome 10
Location:6252192
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g463300 (1 of 1) PTHR31515:SF0 - TRANSMEMBRANE PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACTTGGGTGCAGGGCACGTGGGTGCAGGTAACGGGAGCGTGGACATG
Internal bar code:TTCACGGAATCGACTTGAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:121
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTAGGCAATCTTTGGGG
Suggested primer 2:CGGTGTTTGTGTTCAGCCTG