Insertion junction: CLIP2.032193_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.032193
Chromosome:chromosome 3
Location:6270589
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191800 (1 of 33) PF13855 - Leucine rich repeat (LRR_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGGCGGCGGGCGTGTTTGTATGGAGCGGCGGCGGCGCATACGCAGTC
Internal bar code:ATTCATGTTAAAGGTAGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4276
LEAP-Seq percent confirming:89.7436
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAATCAAGAGTCCCACCG
Suggested primer 2:GCGGGTGGTATGTAGCTGTT