Insertion junction: CLIP2.032201_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032201
Chromosome:chromosome 12
Location:9063045
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544550 (1 of 38) IPR000719//IPR002290//IPR011009 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCTCAGGCGGCCGCGCTGCACCGCCCGGCTGACCAGTTCCAGCTGCTG
Internal bar code:GACACGCCTGCTGTCGTATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1854
LEAP-Seq percent confirming:98.5294
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:GACTACAACCTGTCACGCCA
Suggested primer 2:CGACCCAACGTCACAGAAGA