Insertion junction: CLIP2.032202_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032202
Chromosome:chromosome 13
Location:3193281
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g585250 (1 of 1) PF08005 - PHR domain (PHR) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCTGTGGCGCTGCTGGGCGTGGGGCTGTGCGGCACGGAGGGGGGGCTC
Internal bar code:CATAAGTATTTTGGCCTAACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:68
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCCCTCTCCTTCTCCC
Suggested primer 2:GCTGACGTCAAGTACCTGCT