Insertion junction: CLIP2.032213_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032213
Chromosome:chromosome 1
Location:4675155
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032350 PIG8 p53-induced protein/etoposide-induced protein 2.4; (1 of 1) K10134 - etoposide-induced 2.4 mRNA (EI24) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGTTGGCCTGGGACGGCCGCTGGGACGGGGCGCGCGGCCCTTCGTCA
Internal bar code:CCTTTGAGATGGCCTTGCTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2272
LEAP-Seq percent confirming:79.0698
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCGTTGTATCTGCAGCA
Suggested primer 2:ACCGGCCCCATTCTTACAAG