Insertion junction: CLIP2.032216_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.032216
Chromosome:chromosome 17
Location:2364650
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g713950 HTR21,HTR32 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGCTGGCACTGCAGGAGGCCGCTGAGGCCTACCTGGTGGGCCTGTTT
Internal bar code:GTATTGTTGCGTCCCGGCGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1458
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTGGCGCACACATGAAGG
Suggested primer 2:CTTGGTGATGCCCTGGATGT