Insertion junction: CLIP2.032216_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032216
Chromosome:chromosome 17
Location:2364713
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g713950 HTR21,HTR32 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCAGCTTGCGGATCAGCAGCTCAGTCGACTTCTGGTACTTGCGAATC
Internal bar code:GTATTGTTGCGTCCCGGCGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2278
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGTGATGCCCTGGATGT
Suggested primer 2:TTTTGGCGCACACATGAAGG