Insertion junction: CLIP2.032221_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032221
Chromosome:chromosome 16
Location:2652311
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661450 HTV3 (1 of 35) K11253 - histone H3 (H3); Histone H3 variant intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGTTGACCGACATGGAGTCATATCCTCACACTCACTGGCTTCGACTG
Internal bar code:GCTGTCGCGGGTGGAGGCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1928
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGTACGAGTTGTTGGCT
Suggested primer 2:CAATGCACAGGGGAGGGATT