Insertion junction: CLIP2.032221_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032221
Chromosome:chromosome 16
Location:2652315
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661450 HTV3 (1 of 35) K11253 - histone H3 (H3); Histone H3 variant intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAACCTGCGTGGGCACGTTCGGCAGCGTGGACCAGCGGCTGACCAGCC
Internal bar code:GCTGTCGCGGGTGGAGGCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:6139
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:146
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:146

Suggested primers for confirmation by PCR

Suggested primer 1:CAATGCACAGGGGAGGGATT
Suggested primer 2:CAGGGTACGAGTTGTTGGCT