Insertion junction: CLIP2.032225_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032225
Chromosome:chromosome 3
Location:5357109
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g183250 (1 of 1) IPR027437 - 30s ribosomal protein S13, C-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATATTGGCACAGACTCAGCTTACCAGTGCCGGCGTTGGGCCATTGGCCC
Internal bar code:GTGGCCAATGCCTTCGGGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3195
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GGTACGCTTTAGCATGCTGC
Suggested primer 2:TGAGTGATGTCGTGCCGAAA