Insertion junction: CLIP2.032229_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.032229
Chromosome:chromosome 10
Location:2063290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g432650 (1 of 1) 3.6.1.59 - 5'-(N(7)-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase / M(7)GpppX pyrophosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGACCAGACCAGCTCGGACCAGCTGTACTGTCTGGCTCTGGTGGCGCG
Internal bar code:ACGGATCTACGTGAGTCCCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:100
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGGTAGTAGGAGGGCTG
Suggested primer 2:GGGTAAGCATCAGCCCAAGT