Insertion junction: CLIP2.032240_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.032240
Chromosome:chromosome 9
Location:3019794
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393617 (1 of 21) IPR000679 - Zinc finger, GATA-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTTGCGCAGACCGCCGGCACAGCACGCCCTGCCCATCCCTTCGACGGC
Internal bar code:ATTATTGTATTATGTATAGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1075
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGAGCACCAATGGCTGTA
Suggested primer 2:TCACGGCTGCTCCTTGAAAA