Insertion junction: CLIP2.032248_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032248
Chromosome:chromosome 15
Location:799989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g637750 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCACAGCCGGCGGAAGCAGCAGCAGCGCCGGCAGCGGCGGTCCCGGC
Internal bar code:CCGCTGCATAGTCTAAACACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:610
LEAP-Seq percent confirming:37.931
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCTGAAGTGGGCTGAGG
Suggested primer 2:AGAGACTGGTTCTTGTGCGG