Insertion junction: CLIP2.032253_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032253
Chromosome:chromosome 2
Location:6824877
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388319 (1 of 1) PTHR13390:SF0 - UPF0554 PROTEIN C2ORF43 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATAAGGGTGCGCGGGGCGGGGGTTCGGGGGCTGGGGTGCGGACTGGAT
Internal bar code:GGGCAGAGGCCAAAGCGGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:794
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCCAACAGTTCGTAGT
Suggested primer 2:ACGATCCCCAAATCCCCAAC