Insertion junction: CLIP2.032255_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032255
Chromosome:chromosome 9
Location:897072
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403300 (1 of 1) K03144 - transcription initiation factor TFIIH subunit 4 (TFIIH4, GTF2H4, TFB2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCTTACCTGGCGCTACCCAACACAGACTTTGTGGACAGCTGGGCAGC
Internal bar code:AGTCACAATTCGTGGGTGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2067
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCATATGGCTTCGTCACGGA
Suggested primer 2:TAGATAGCGTGCTCTTGGCG