Insertion junction: CLIP2.032258_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032258
Chromosome:chromosome 7
Location:2498954
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329550 VFL5 Variable flagella protein 5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGGGCGGCGTGGAATCACTGGCGGCTGCGGTACTGCAGCGCAGCCGCA
Internal bar code:CGTCAAGTTTCCGTCTTATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:3827
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GACGAATGAGGCGGAAATGC
Suggested primer 2:CCATCCCCCATGAAACGGAA