Insertion junction: CLIP2.032262_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032262
Chromosome:chromosome 8
Location:3181422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376650 CSR5 Carbohydrate sulfotransferase-related 5; (1 of 6) 2.8.2.8 - [Heparan sulfate]-glucosamine N-sulfotransferase / PAPS:N-desulfoheparin sulfotransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCGAGACAGCCAGGACGCAGCAGCGAGTCAGACAGGCGGTGCGGCGG
Internal bar code:GAGAAGAAAGCAGGCCTAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2440
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTACCTTCCATCGGAGA
Suggested primer 2:TCACACAGTCTGAACTCGCC