Insertion junction: CLIP2.032293_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032293
Chromosome:chromosome 1
Location:8149264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g068012 PPR5,FAP330 (1 of 6) PF01535 - PPR repeat (PPR); PentatricoPeptide Repeat protein 5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGGGACAGCCCTCGGCCGGATCGCTGGGCGGCACACCCCGCGTGTCG
Internal bar code:TCCTTTGGTTGTGGCTTGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2950
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCCCCCAGAGTCTTCTA
Suggested primer 2:CGAGTCGTCTGTTAGCTCCC