Insertion junction: CLIP2.032302_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032302
Chromosome:chromosome 5
Location:984527
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247100 COPT1,COTH1 spore coat protein H; (1 of 3) PF08757 - CotH protein (CotH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCCGACAAGCGCCAGCGCACCCCCACCTCCATCTACTCCACACGGTG
Internal bar code:TGTTGTGTGAGCGTTTCATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:220
LEAP-Seq percent confirming:54.8387
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGCAGTGACAAAGCAACG
Suggested primer 2:GTCTCCTGCTGGAACCCTTC