Insertion junction: CLIP2.032308_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032308
Chromosome:chromosome 1
Location:6715486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g048000 TPM1 Tropomyosin 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAATCTCCTAGCATTCTCAACGACCATCTCTGCGTCCCTCCTCGCCCTA
Internal bar code:TATGCCTAATGTTCTTGCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4823
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGCCAGAAGCCCTGAAT
Suggested primer 2:CAGCATATTCACCGTGTGCG