Insertion junction: CLIP2.032315_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.032315
Chromosome:chromosome 2
Location:2861768
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800207 (1 of 8) PF06011 - Transient receptor potential (TRP) ion channel (TRP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTTCATTATTTCGTACGAGCCTCACCCGCAAACACAATGACGGCGGTG
Internal bar code:TTTCCTGGTGGCGCGGAATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1086
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTGCCGTTGTCAGTGTC
Suggested primer 2:TACACACACGCTCACCAGTC