Insertion junction: CLIP2.032316_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032316
Chromosome:chromosome 1
Location:6246259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044350 (1 of 2) PTHR11319//PTHR11319:SF28 - G PROTEIN-COUPLED RECEPTOR-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTACGATGGGTGCGAGTAGCTGTTGGCGCTTCCCTTGCGATATCTGCA
Internal bar code:CGGTCGATCAAATCATCGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1273
LEAP-Seq percent confirming:93.9394
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CAAATGCCGTAACCCTCCCT
Suggested primer 2:ATTCTATGCCGAGCAGTCCG