Insertion junction: CLIP2.032326_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032326
Chromosome:chromosome 17
Location:3959245
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802076 (1 of 1) IPR000104//IPR026847 - Antifreeze protein, type I // Vacuolar protein sorting-associated protein 13 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGCACAACGAGCTGTGCGCCGCAAGGCAGGCGCTGCCTAACATGCAG
Internal bar code:ATAAGTAGTGCCTACTTTCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1128
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACATGCACTTGC
Suggested primer 2:GAGCTCACACCAAAAGCTGC