Insertion junction: CLIP2.032332_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032332
Chromosome:chromosome 11
Location:3547221
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477850 TXC1,TSN1 (1 of 1) K15979 - staphylococcal nuclease domain-containing protein 1 (SND1); Transcriptional coactivator-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTCAGCAGCGCCAGTGCCAGGTTGAAGGGCTTGCCGCTGGCGGTGGC
Internal bar code:AGGGGGCATGGACTAAAAGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:625
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTAGAGGTGTGTGTGGG
Suggested primer 2:TCCTGATCCGGAGTCCAGTT