Insertion junction: CLIP2.032338_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032338
Chromosome:chromosome 2
Location:1705017
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085950 (1 of 1) PTHR33415//PTHR33415:SF3 - FAMILY NOT NAMED // EMB514 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCGTCGGACATGGCGAGCTTCTTGGTGGTGAAAGTATGCAGGGGGTGC
Internal bar code:TACACCAACTTTTGGAATATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:6923
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:116
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:116

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGGACTGGAGTCTTCAA
Suggested primer 2:ATCTCACCTTGCTATCCGCG