Insertion junction: CLIP2.032341_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032341
Chromosome:chromosome 6
Location:5110479
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00144780

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGAGACCCCAGAATTGGGGCGGGTGCAACCACCAGGAAGCAAGGATG
Internal bar code:GATAGGTCATTTAAAAATACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2870
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GATAGTGGTGGTGGTGTGGG
Suggested primer 2:GAAACGTATTGCCGCCCATC