Insertion junction: CLIP2.032347_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032347
Chromosome:chromosome 4
Location:1494957
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213800 (1 of 1) PTHR10825//PTHR10825:SF5 - RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT // E3 UBIQUITIN-PROTEIN LIGASE RING1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACATGCGCCCGCATCGGTTTTGCGGCTGTGCCCGTGTACGCACCACC
Internal bar code:ATACGTGCATACCCTCAGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4827
LEAP-Seq percent confirming:98.913
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:TACCCTGTCCCATCGCACTA
Suggested primer 2:CCCCCACTACAGCTGTTGAG