Insertion junction: CLIP2.032347_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032347
Chromosome:chromosome 4
Location:1494968
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213800 (1 of 1) PTHR10825//PTHR10825:SF5 - RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT // E3 UBIQUITIN-PROTEIN LIGASE RING1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTTCTCGAAACCACAAGCCACCTCTGCCTACCAGACGCTAGCCCCGT
Internal bar code:AAGATGGACGAAAATTTAGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1531
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCACTACAGCTGTTGAG
Suggested primer 2:TACCCTGTCCCATCGCACTA