Insertion junction: CLIP2.032369_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032369
Chromosome:chromosome 7
Location:1476064
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g324000 NUP160 Nucleoporin 160; (1 of 54) IPR011047 - Quinonprotein alcohol dehydrogenase-like superfamily intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCATACGAGCAAGGACCGGCGCCAGCTGCAGCTCTGCTGCGCCACGC
Internal bar code:TAGGGGTATATACGAGTACTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1014
LEAP-Seq percent confirming:42.5532
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CTGACTCCCATTCCACACCC
Suggested primer 2:ACAACCCTAATCCGAGCAGC