Insertion junction: CLIP2.032374_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032374
Chromosome:chromosome 6
Location:3688578
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278152 (1 of 40) 3.4.24.38 - Gametolysin / Lysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACTACGACACCTGCTCGTACGGCAAGCTCAACTACCTCGCCACCAACA
Internal bar code:GCAGTTGAAGGTTCTGTTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1046
LEAP-Seq percent confirming:47.8261
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCCTCCACTTCCTCTCT
Suggested primer 2:GTGACGCGTTTGTGCTTGAT