Insertion junction: CLIP2.032382_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032382
Chromosome:chromosome 11
Location:4114334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00166145

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCTAGCTCCCAGCCACTCCCAGGCGTTCTTGGAGTCCCTAAGCGCCG
Internal bar code:CACATGAGTCCTCGCTTAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1080
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAATGCGTGATTGCGGAT
Suggested primer 2:TAGTCAGAGGCTGTTCCGGA