Insertion junction: CLIP2.032394_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032394
Chromosome:chromosome 1
Location:224069
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001400 ZMP1 (1 of 1) 3.4.24.36 - Leishmanolysin / Promastigote surface endopeptidase; Zinc-metallopeptidase-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAAGGCAGCCTGGCCATTGAGCGCCGCCGCCTGCAGCAGGTGAGACCC
Internal bar code:TATTGCATAATGTGTCGGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:221
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCGGGGTAGTAGGACAGG
Suggested primer 2:ACATACCTCTTTGCCTGCCC