Insertion junction: CLIP2.032398_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032398
Chromosome:chromosome 3
Location:5771169
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187550 (1 of 1) PF04858 - TH1 protein (TH1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCATGCTGATGGTGAAGTGGCTGGAGTACGTGGACGACGAGCCGGCG
Internal bar code:AACTAGGTTTCCTGCTAAGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:473
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGACACATGCACACGTA
Suggested primer 2:CTTGTGCGGCAAAGCTTCTT