Insertion junction: CLIP2.032398_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.032398
Chromosome:chromosome 3
Location:5771169
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187550 (1 of 1) PF04858 - TH1 protein (TH1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCGCGTAGCCTGGCGGGGTGGGTTCATGGGGTGAATTTATCGGTTGC
Internal bar code:GGGGTCGCATGTCCGGTTGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:232
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTGCGGCAAAGCTTCTT
Suggested primer 2:TGACGACACATGCACACGTA