Insertion junction: CLIP2.032408_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032408
Chromosome:chromosome 10
Location:5987358
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g461400 (1 of 1) PTHR22957:SF212 - [PROTEIN ADP-RIBOSYLARGININE] HYDROLASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCAGGTCTTGAGTTTGCGGACAACCCTGTCTGACACCGTTTTGCGCT
Internal bar code:CGGATTTACTTTTAGTGGCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:508
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGCATACGTGGGAACAA
Suggested primer 2:GCTCAGTAGATGGCGGAGTC