Insertion junction: CLIP2.032413_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.032413
Chromosome:chromosome 12
Location:9875171
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543902 (1 of 1) 2.7.1.16 - Ribulokinase / L-ribulokinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCAACGCCGTGCCGAGGCACCGACATGCCCTGTCCCCGCCACGCCACG
Internal bar code:TTAATTAGCAGTTACTTGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2656
LEAP-Seq percent confirming:89.1089
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:101

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTAGCGAACCCCGGAATC
Suggested primer 2:CGTGCTTGAGTGTGAGTCCT