Insertion junction: CLIP2.032424_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032424
Chromosome:chromosome 7
Location:161254
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g313206 (1 of 2) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACCGCATCAGACTGGTAGGGCCGGAGGGGGGGCAGCACAACCGGGCC
Internal bar code:AATAATGGTGTGGGAACGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:166
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAGCTCACGTCCCCTTG
Suggested primer 2:ACTGCGAGTTGAGTGAGGTG