Insertion junction: CLIP2.032427_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.032427
Chromosome:chromosome 14
Location:1514932
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g617750 PDE1,PDE3 (1 of 4) K13293 - cAMP-specific phosphodiesterase 4 (PDE4); 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATATCGGCTGTTGTGTGGGGCACAAGTTGCCGCGTCAACGTTATCGTT
Internal bar code:TAGCCGTATTGACTCCACTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1909
LEAP-Seq percent confirming:78.125
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCCACTCCGTCTTTCAT
Suggested primer 2:TGTCAACAAGTCCGGACTCG