Insertion junction: CLIP2.032428_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032428
Chromosome:chromosome 10
Location:1559783
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428950 (1 of 1) PTHR11019//PTHR11019:SF97 - THIJ/PFPI // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCTTCTACGCCAACGACCCCGACTCCAAGCCCCTGGTGCGTGCGTGC
Internal bar code:CGACAAGTAATCTGCAACGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:7603
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGACATCCAGCATCCCC
Suggested primer 2:CTCCTGTGCAGTTGTGTTGC