Insertion junction: CLIP2.032436_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.032436
Chromosome:chromosome 13
Location:1719620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g574350 (1 of 4) IPR000719//IPR001245//IPR002290//IPR006189//IPR011009//IPR020635 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // CHASE domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCGTGGGCGAAGCGGATGGAACCCTGACTTCTCTTGAATACCCAACC
Internal bar code:CGTATTACTATTATAAGGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2227
LEAP-Seq percent confirming:96.0784
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTTGTTTGTTCTTGGGG
Suggested primer 2:AGTTATGGCAACCCCGAGTG