Insertion junction: CLIP2.032459_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032459
Chromosome:chromosome 8
Location:4161319
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383600 SRR21 Scavenger receptor cysteine rich (SRCR) protein; (1 of 1) IPR001190//IPR017448//IPR029062 - SRCR domain // SRCR-like domain // Class I glutamine amidotransferase-like CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCAACCACAGCTGCTGCCGGGCCCCGCTGTCGCCGCCTACCTGGGGGC
Internal bar code:GGTAATTTGAGTAGTTCGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4106
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCACGCCACCAGTTAGA
Suggested primer 2:TGCTCTCACACCATGTGTCC