Insertion junction: CLIP2.032460_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032460
Chromosome:chromosome 9
Location:2243254
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395000 (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCCGCCGCCGCCGCAGCTGCTGCGGCTGCGCGGCTGTTGGCGCCGGCA
Internal bar code:ATTATCGGGCTAGAGTCTTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1561
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGATGGGTTTTGCTGGTG
Suggested primer 2:GTGCTGCACATCCTCTCCTT