Insertion junction: CLIP2.032461_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.032461
Chromosome:chromosome 5
Location:2548848
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g239400 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCTTATTGAACTCGCTACGCAGCGTGCGCAGTTCCGTCAGAAGCTGCC
Internal bar code:GCCATTCGCGCGGCCTAGGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1633
LEAP-Seq percent confirming:93.9394
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTAATTGCGAGGCGAAG
Suggested primer 2:CCATGACGACTGATGCTGGT