Insertion junction: CLIP2.032462_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032462
Chromosome:chromosome 10
Location:2316274
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g434400 PF6 (1 of 1) K19090 - CRISPR-associated protein Cas5t (cas5t); Flagellar central pair-associated protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGGGCGCCAGCGGCGGCGCCAGGCTGGGGTCGTCGGCGGGCGCCACCA
Internal bar code:GAATGGCGGTTAATAGCTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4240
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTAAGAAGAAGGCGGAGG
Suggested primer 2:GCCCTTCTTTAGCGTGTCCT